Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4954
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.5
phage PUT8 MOI 0.1 -0.5
carbon source butyrate (C) -0.5
phage PUT8 MOI 0.1 -0.4
temperature shift Temperature shift 10_to_30; with MOPS +0.4
pH Growth at pH6 and (C) D-Glucose +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
pH pH 7 +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
nitrogen source DL-2-Aminobutyric (N) +0.5
carbon source D-Glucose (C); with MOPS +0.5
no stress control Growth with no stress +0.5
no stress control Growth with no stress +0.5
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
nitrogen source Ammonium chloride (N) +0.5
nitrogen source DL-2-Aminobutyric (N) +0.5
nitrogen source NAG (N); with MOPS +0.6
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7
carbon source D-Glucose (C) +0.7
temperature Growth at 25C +0.8
temperature Growth at 25C +0.8
carbon source D-Glucose (C) +0.8
nitrogen source Ammonium chloride (N) +0.9
carbon source D-Glucose (C) +1.3
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PP_4954