Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4907
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-1.2
temperature	Growth at 25C	-1.2
phage	P. putida Sci small MOI 0.1	-1.1
carbon source	Heptanoic (C)	-0.9
pH	Growth at pH7 and (C) D-Glucose	-0.9
carbon source	D-Lysine 10 mM (C)	-0.9
carbon source	D-Lysine 10 mM (C)	-0.9
carbon source	butyrate (C)	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
carbon source	Oleic (C)	-0.7
nitrogen source	nitrogen source nitrite 1mM	-0.6
temperature	Growth at 30C; with MOPS	+0.6
nitrogen source	DL-2-Aminobutyric (N)	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.6
temperature shift	Temperature shift 30_to_25; with MOPS	+0.6
nitrogen source	Urea (N)	+0.6
nitrogen source	DL-2-Aminobutyric (N)	+0.7
nitrogen source	Ammonium chloride (N); with MOPS	+0.7
temperature shift	Temperature shift 30_to_25	+0.7
carbon source	Valerolactone (C)	+0.7
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+0.7
carbon source	Delta-Undecalactone (C)	+0.7
pH	Growth at pH6 and (C) Trisodium citrate	+0.7
carbon source	ferulate (C); with MOPS	+0.8
nitrogen source	Propiolactam (N)	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
nitrogen source	no extra (N); with MOPS	+0.8
carbon source	4-Hydroxyvalerate (C) (40mM)	+1.5
carbon source	4-Hydroxyvalerate (C) (40mM)	+1.6
		remove PP_4907