Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_4879
nitrogen source	Propandiamine (N)	-1.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.6
nitrogen source	Carnitine Hydrochloride (N)	-1.5
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5
temperature shift	Temperature shift 30_to_25	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.4
nitrogen source	spermidine (N)	-1.4
nitrogen source	Adenine (N)	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-1.3
nitrogen source	Urea (N)	-1.3
carbon source	Lignin Monomers (C)	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
nitrogen source	nitrogen source nitrite 1mM	-1.2
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.2
carbon source	propionate (C)	-1.2
nitrogen source	2,6-diaminopimelic (N)	-1.1
no stress control	Growth with no stress	-1.1
nitrogen source	D-2-Aminobutyric (N)	-1.1
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.1
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+1.1
carbon source	carbon source 3-O-methyl-glucose 10 mM	+1.2
carbon source	carbon source Bisabolol 45 mM	+1.2
pH	pH 9	+1.3
pH	pH 4	+1.6
carbon source	carbon source Glycerol 108.6 mM	+1.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	+2.0
		remove PP_4879