Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4853
nitrogen source	nitrate (N)	-0.7
carbon source	1,3-Butandiol (C)	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.4
carbon source	D-Fructose (C)	-0.4
carbon source	Tween 20 (C)	-0.3
phage	P. putida South MOI 10	-0.3
nitrogen source	NAG (N); with MOPS	+0.3
carbon source	DL-3-Hydroxyisobutyric (C)	+0.3
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+0.3
pH	Growth at pH7 and (C) Trisodium citrate	+0.4
pH	Growth at pH9 and (C) Trisodium citrate	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.4
stress	Growth with Chloride 500 mM; with MOPS	+0.4
temperature shift	Temperature shift 30_to_34; with MOPS	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.4
carbon source	D-Glucose (C); with MOPS	+0.4
no stress control	Growth with no stress	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
nitrogen source	Propiolactam (N)	+0.7
nitrogen source	Propiolactam (N)	+0.8
		remove PP_4853