Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4820
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4
pH Growth at pH6 and (C) D-Glucose -1.4
carbon source butyrate (C) -1.2
carbon source carbon source 4-vinylphenol 0.1 mM -1.2
carbon source 1,3-Hexanediol (C) -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1
carbon source Valerolactone (C) -1.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.1
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1
pH Valerolactone (C) pH 6.5 -1.1
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0
micoeukaryotes C.elegans, mixed culture-2 -1.0
micoeukaryotes C.elegans, mixed culture-1 -1.0
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9
pH pH 5 -0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9
carbon source L-tyrosine 5 mM (C) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8
stress Butyrolactam 2 vol% +0.8
nitrogen source Urea (N) +0.8
nitrogen source Propandiamine (N) +0.9
carbon source L-Isoleucine (C) +1.0
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.1
carbon source L-Leucine (C) +1.2
carbon source L-Leucine (C) +1.6
carbon source L-Leucine (C) +1.9
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PP_4820