Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4818
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.5
dilutelb LB 0.1x with 55.5 mM D-Glucose -1.9
pH Growth at pH6 and (C) Trisodium citrate -1.8
pH Growth at pH6 and (C) Trisodium citrate -1.6
nitrogen source nitrate (N) -1.5
temperature shift Temperature shift 10_to_25; with MOPS -1.4
pH pH 9 -1.4
nitrogen source Urea (N) -1.3
pH Growth at pH9 and (C) Trisodium citrate -1.1
carbon source Crotonic (C) -1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0
carbon source carbon source 2-Deoxy-D-glucose 10 mM -1.0
pH pH 6 -0.9
carbon source carbon source 4-vinylphenol 0.1 mM -0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9
temperature shift Temperature shift 10_to_25 -0.9
temperature shift Temperature shift 30_to_25 -0.9
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.8
temperature Growth at 25C -0.8
stress R2A with Fusaric 480 ug/mL -0.8
phage P. putida South MOI 10 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8
nitrogen source Ammonium chloride (N) -0.8
temperature shift Temperature shift 30_to_25 -0.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
carbon source Valerolactone (C) +0.8
nitrogen source 2,6-diaminopimelic (N) +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.3
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PP_4818