Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4814
nitrogen source NAG (N); with MOPS -6.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.8
carbon source L-Leucine (C) -3.8
nitrogen source L-Leucine (N) -2.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.0
carbon source L-Leucine (C) -2.0
nitrogen source nitrate (N) -1.9
nitrogen source L-Leucine (N) -1.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.8
nitrogen source Propiolactam (N) -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.7
temperature shift Temperature shift 30_to_21; with MOPS -1.7
pH Growth at pH6 and (C) Trisodium citrate -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.6
nitrogen source Propandiamine (N) -1.5
nitrogen source Urea (N) -1.5
carbon source L-Leucine (C) -1.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3
carbon source carbon source 3-O-methyl-glucose 50 mM +1.3
temperature Growth at 30C; with MOPS +1.4
stress Growth with Chloride 200 mM +1.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7
carbon source ferulate (C); with MOPS +1.7
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PP_4814