Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4778
nitrogen source	NAG (N); with MOPS	-2.1
carbon source	2-Methylbutanoic (C)	-1.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3
phage	P. putida Sci Big MOI 0.1	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.2
nitrogen source	nitrate (N)	-1.2
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM	-1.2
phage	P. putida Missley MOI 0.1	-1.2
carbon source	L-Proline (C)	-1.1
pH	pH 9	-1.0
nitrogen source	Propandiamine (N)	-1.0
nitrogen source	D-2-Aminobutyric (N)	-1.0
temperature shift	Temperature shift 30_to_34; with MOPS	-0.9
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
carbon source	Trisodium citrate 10 mM (C)	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8
temperature	Growth at 30C; with MOPS	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.8
pH	D-Glucose (C) pH 6	-0.8
temperature	Growth at 25C	-0.8
carbon source	L-tyrosine 5 mM (C)	-0.8
carbon source	BC Lignin Sorghum 20 vol% (C)	+0.8
pH	D-Glucose (C) pH 7.5	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
nitrogen source	nitrate (N)	+1.0
stress	Growth with Chloride 500 mM; with MOPS	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
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