Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_4768
temperature shift	Temperature shift 30_to_21; with MOPS	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.2
nitrogen source	Urea (N); with MOPS	-1.1
nitrogen source	NAG (N); with MOPS	-1.1
stress	Growth with Chloride 500 mM; with MOPS	-1.1
stress	R2A with Fusaric 240 ug/mL	-1.1
carbon source	acetate (C)	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.9
carbon source	carbon source Glycerol 108.6 mM	-0.9
carbon source	carbon source Bisabolene 48.9 mM	-0.8
pH	Growth at pH9 and (C) Trisodium citrate	-0.8
phage	P. putida Sci small MOI 0.1	-0.8
carbon source	carbon source Bisabolol 45 mM	-0.8
phage moi 100	Time6-phageFRS	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.7
carbon source	a-Ketoglutaric (C)	-0.7
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.7
carbon source	Delta-Dodecalactone (C)	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	+0.8
stress	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL	+0.9
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.9
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	+0.9
nitrogen source	D-2-Aminobutyric (N)	+1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+1.2
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