Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4702
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.4
carbon source	Delta-Dodecalactone (C)	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.3
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.3
pH	pH 5	-0.3
temperature	Growth at 25C; with MOPS	-0.3
nitrogen source	Ammonium chloride (N)	-0.3
carbon source	butyrate (C)	-0.3
carbon source	4-Methyl-2-oxopentanoic (C)	-0.3
phage	P. putida Sci Big MOI 0.1	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-0.3
carbon source	Trisodium citrate 10 mM (C)	-0.3
carbon source	L-Leucine (C)	-0.3
nitrogen source	D-2-Aminobutyric (N)	-0.3
nitrogen source	Propandiamine (N)	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.3
carbon source	Heptanoic (C)	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.3
nitrogen source	nitrite (N)	+0.3
nitrogen source	Caprolactam (N)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
micoeukaryotes	C.elegans, mixed culture-2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.3
temperature shift	Temperature shift 10_to_25; with MOPS	+0.3
stress	Growth with Chloride 500 mM; with MOPS	+0.3
carbon source	ferulate (C); with MOPS	+0.3
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