Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4701
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.4
carbon source Tween 20 (C) -5.4
pH Growth at pH6 and (C) D-Glucose -4.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -4.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.7
nitrogen source Urea (N); with MOPS -4.6
temperature shift Temperature shift 30_to_34; with MOPS -4.6
nitrogen source NAG (N); with MOPS -4.6
carbon source acetate (C) -4.6
pH Growth at pH6 and (C) Trisodium citrate -4.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.5
stress R2A with Polymyxin B sulfate 0.002 mg/ml -4.3
carbon source Valeric (C) -4.3
micoeukaryotes C.elegans, mixed culture-2 -4.3
phage P. putida Missley MOI 0.1 -4.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -4.0
carbon source Octanoic (C) -3.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -3.8
no phage control Time6-nophage -3.6
temperature Growth at 25C -3.5
pH D-Glucose (C) pH 6 -3.3
pH pH 8 -3.3
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -3.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.3
pH D-Glucose (C) pH 7 -3.2
pH D-Glucose (C) pH 7.5 -3.2
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -3.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.2
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -3.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.1
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PP_4701