Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4642
phage	P. put South MOI 10	-5.3
carbon source	Myristic (C)	-4.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-4.1
stress	NaCl stress 250 mM	-4.0
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-3.6
carbon source	ferulate (C); with MOPS	-3.3
nitrogen source	Ammonium chloride (N)	-2.9
nitrogen source	D-2-Aminobutyric (N)	-2.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.8
phage	P. putida Sci small MOI 0.1	-2.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-2.5
stress	Growth with Chloride 500 mM; with MOPS	-2.4
pH	pH 7	-2.4
carbon source	4-Hydroxyvalerate (C) (40mM)	-2.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-2.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.2
nitrogen source	nitrite (N)	-2.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-2.1
nitrogen source	D-Lysine (N)	-2.1
pH	Growth at pH7 and (C) Trisodium citrate	-2.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.0
carbon source	Soil Extract with D-Glucose 10 mM; 15C	-2.0
pH	Growth at pH8 and (C) Trisodium citrate	-1.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-1.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.9
phage	PUT 8 MOI 1	-1.9
temperature	Growth at 30C; with MOPS	-1.8
carbon source	Trisodium citrate 10 mM (C)	-1.8
carbon source	D-Glucose (C)	+2.0
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