Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4636
carbon source Crotonic (C) -1.2
phage P. putida Sci Big MOI 0.1 -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0
nitrogen source D-2-Aminobutyric (N) -0.9
stress NaCl stress 250 mM -0.9
pH pH 9 -0.8
carbon source L-Leucine (C) -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.8
carbon source carbon source D-Glucose 55.5 mM -0.7
pH Growth at pH6 and (C) Trisodium citrate -0.7
pH D-Glucose (C) pH 6 -0.7
pH D-Glucose (C) pH 7 -0.7
temperature shift Temperature shift 30_to_25; with MOPS -0.7
pH pH 8 -0.6
pH pH 5 -0.6
carbon source L-Phenylalanine 5 mM (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
carbon source carbon source 3-O-methyl-glucose 10 mM -0.6
carbon source carbon source 3-O-methyl-glucose 50 mM -0.6
pH pH 6 -0.6
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -0.6
nitrogen source nitrogen source nitrite 1mM +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6
pH Growth at pH6 and (C) Trisodium citrate +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
phage P. putida South MOI 10 +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
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PP_4636