Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_4618
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.5
pH	D-Glucose (C) pH 7.5	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.5
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
r2a control	R2A control	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
temperature	Growth at 25C	+0.5
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.5
phage	P. putida South MOI 0.1	+0.5
stress	Butanol 0.6 vol%	+0.5
carbon source	carbon source Bisabolol 45 mM	+0.5
carbon source	carbon source 3-O-methyl-glucose 10 mM	+0.5
pH	Growth at pH9 and (C) D-Glucose	+0.5
carbon source	D-Glucose (C)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6
nitrogen source	2,6-diaminopimelic (N)	+0.6
pH	Growth at pH7 and (C) D-Glucose	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.6
pH	Growth at pH6 and (C) Trisodium citrate	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
carbon source	Valerolactone (C)	+0.7
nitrogen source	nitrogen source Ammonium chloride 20mM	+0.7
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