Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4605
carbon source	L-tyrosine 5 mM (C)	-0.8
carbon source	L-tyrosine 5 mM (C)	-0.6
temperature	Growth at 25C	-0.6
carbon source	L-tyrosine 5 mM (C)	-0.6
carbon source	Glycerol (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
phage	P. putida Sci Big MOI 0.1	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
phage	P. putida South MOI 0.1	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
nitrogen source	Urea (N)	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4
carbon source	Glucose (C) (20mM)	+0.4
nitrogen source	NAG (N); with MOPS	+0.4
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.4
phage	PUT8 MOI 0.1	+0.4
nitrogen source	NAG (N)	+0.4
carbon source	L-Leucine (C)	+0.4
pH	Growth at pH9 and (C) Trisodium citrate	+0.4
carbon source	L-Leucine (C)	+0.4
carbon source	Valerolactone (C)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
nitrogen source	Propiolactam (N)	+0.4
nitrogen source	nitrogen source nitrite 0.5mM	+0.4
carbon source	D-Glucose (C); with MOPS	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.6
nitrogen source	2,6-diaminopimelic (N)	+0.6
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