Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_4601
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
carbon source	Vanillin (C)	-0.9
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	Protocatechuic Acid (C)	-0.7
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
carbon source	ferulate (C); with MOPS	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6
carbon source	Delta-Decalactone (C)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.6
carbon source	3-Hydroxyhexanoic (C)	-0.5
carbon source	DL-3-Hydroxyisobutyric (C)	-0.5
carbon source	4-Hydroxybenzoic Acid (C)	-0.5
phage	PUT8 MOI 0.1	-0.5
carbon source	Ferulic Acid (C)	-0.5
carbon source	rac-3-Hydroxypentanoic Acid (C)	-0.5
pH	Growth at pH7 and (C) D-Glucose	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	+0.5
carbon source	acetate (C)	+0.6
carbon source	carbon source 4-vinylphenol 0.1 mM	+0.6
nitrogen source	NAG (N); with MOPS	+0.6
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	+0.6
carbon source	butyrate (C)	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
nitrogen source	nitrate (N)	+0.7
		remove PP_4601