Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4594
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
carbon source D-Glucose (C) -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.5
phage P. putida Sci Big MOI 0.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
carbon source ferulate (C); with MOPS -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
r2a control R2A control -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
carbon source L-Lysine (C) -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
pH Valerolactone (C) pH 6.5 +0.4
carbon source L-Leucine (C) +0.4
nitrogen source Hydantoin (N) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
pH Growth at pH7 and (C) Trisodium citrate +0.4
no stress control Growth with no stress +0.5
pH pH 8 +0.5
nitrogen source D-2-Aminobutyric (N) +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
phage P. putida Sci small MOI 0.1 +0.6
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.6
stress R2A with Fusaric 480 ug/mL +0.6
carbon source ferulate (C); with MOPS +0.9
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PP_4594