Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4477
carbon source	L-Arginine (C)	-5.6
nitrogen source	L-Arginine (N)	-5.1
nitrogen source	L-Arginine (N)	-4.9
carbon source	Delta-Nonalactone (C)	-1.7
nitrogen source	Beta-alanine (N)	-1.6
nitrogen source	Beta-alanine (N)	-1.6
nitrogen source	Propandiamine (N)	-1.6
nitrogen source	L-Leucine (N)	-1.6
carbon source	ferulate (C); with MOPS	-1.5
carbon source	D-Glucose (C); with MOPS	-1.5
nitrogen source	Urea (N)	-1.3
nitrogen source	Propandiamine (N)	-1.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.2
temperature shift	Temperature shift 10_to_34; with MOPS	-1.2
pH	Growth at pH7 and (C) Trisodium citrate	-1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
temperature shift	Temperature shift 10_to_30	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
pH	Valerolactone (C) pH 6.5	-1.1
nitrogen source	NAG (N); with MOPS	-1.1
nitrogen source	D-2-Aminobutyric (N)	+1.3
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+1.3
nitrogen source	D-2-Aminobutyric (N)	+1.3
stress	Butanol 0.6 vol%	+1.4
stress	1-Pentanol 0.3 vol%	+1.4
stress	3-methyl-3-butenol (pure) 0.25 vol%	+1.6
stress	3-methyl-1-butanol 0.4 vol%	+1.8
		remove PP_4477