Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4422
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5
nitrogen source Ammonium chloride (N) -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
pH Growth at pH7 and (C) Trisodium citrate -0.5
pH Growth at pH8 and (C) D-Glucose -0.5
pH pH 9 -0.5
carbon source 4-Hydroxyvalerate (C) (40mM) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
temperature shift Temperature shift 30_to_34; with MOPS -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5
phage P. putida PUT 7 MOI 1 +0.5
nitrogen source Propandiamine (N) +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5
nitrogen source 6-aminocaproic (N) +0.6
nitrogen source 6-aminocaproic (N) +0.7
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.7
phage P. putida Missley MOI 0.1 +0.7
carbon source 5-Aminovaleric 10 mM (C) +0.7
micoeukaryotes C.elegans, mixed culture-1 +0.8
carbon source 5-Aminovaleric 10 mM (C) +0.8
micoeukaryotes C.elegans, mixed culture-2 +0.9
carbon source Valerolactam 10 mM (C) +1.3
nitrogen source Caprolactam (N) +1.8
nitrogen source Caprolactam (N) +1.8
nitrogen source Caprolactam (N) +3.3
nitrogen source Caprolactam (N) +3.5
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PP_4422