Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4420
stress	NaCl stress 250 mM	-0.5
nitrogen source	Ammonium chloride and TNT (N)	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
carbon source	Tween 20 (C)	-0.3
carbon source	carbon source D-Glucose 55.5 mM	-0.3
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.3
pH	Growth at pH6 and (C) Trisodium citrate	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
temperature shift	Temperature shift 10_to_25; with MOPS	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
carbon source	rac-3-Hydroxypentanoic Acid (C)	-0.3
carbon source	D-Lysine 10 mM (C)	-0.3
phagefrs	Time6-FRS	-0.3
stress	Cholinium dihydrogen phosphate 10 vol%	+0.3
carbon source	Valeric (C)	+0.3
phage	P. putida Sci Big MOI 0.1	+0.3
carbon source	L-Leucine (C)	+0.3
nitrogen source	nitrogen source nitrite 1mM	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
stress	Growth with Chloride 500 mM	+0.3
carbon source	D-Fructose (C)	+0.3
carbon source	Myristic (C)	+0.3
nitrogen source	2,6-diaminopimelic (N)	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
nitrogen source	D-2-Aminobutyric (N)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
phage	P. putida PUT 7 MOI 1	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7
phage	P. putida Missley MOI 0.1	+0.9
		remove PP_4420