Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_4377
carbon source	L-Leucine (C)	-1.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.6
temperature	Growth at 25C; with MOPS	-1.6
carbon source	acetate (C)	-1.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM	-1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.3
carbon source	L-Phenylalanine 5 mM (C)	-1.2
pH	Growth at pH7 and (C) Trisodium citrate	-1.1
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.1
nitrogen source	2,6-diaminopimelic (N)	-1.0
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
nitrogen source	Hydantoin (N)	-0.9
pH	Growth at pH6 and (C) Trisodium citrate	-0.9
temperature	Growth at 30C; with MOPS	-0.9
nitrogen source	D-2-Aminobutyric (N)	-0.9
temperature	Growth at 25C	-0.9
nitrogen source	D-2-Aminobutyric (N)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8
temperature shift	Temperature shift 10_to_25; with MOPS	-0.8
stress	Growth with Chloride 500 mM	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0
stress	Geraniol 1 vol%	+1.6
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