Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4350
carbon source	Tween 20 (C)	-1.2
temperature	Growth at 25C	-1.0
phage moi 100	Time6-phageFRS	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.9
carbon source	ferulate (C); with MOPS	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
nitrogen source	nitrate (N)	-0.6
temperature shift	Temperature shift 30_to_10; with MOPS	-0.6
carbon source	acetate (C)	-0.6
nitrogen source	D-2-Aminobutyric (N)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
pH	Growth at pH8 and (C) Trisodium citrate	-0.6
carbon source	Valerolactone (C)	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.5
nitrogen source	nitrate (N)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
temperature shift	Temperature shift 30_to_4; with MOPS	-0.5
pH	pH 5	-0.5
nitrogen source	nitrogen source nitrate 5mM	+0.5
phage	PUT8 MOI 0.1	+0.5
pH	Growth at pH6 and (C) D-Glucose	+0.5
phage	PUT8 MOI 10	+0.5
phage	P. putida Sci Big MOI 0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
phage	P. putida Missley MOI 0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.6
nitrogen source	2,6-diaminopimelic (N)	+0.6
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