Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4346
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.6
pH	Growth at pH8 and (C) D-Glucose	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
nitrogen source	2,6-diaminopimelic (N)	-0.4
stress	R2A with Fusaric 480 ug/mL	-0.4
carbon source	Ethyl decanoate and D-Glucose (C)s	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
carbon source	acetate (C)	-0.3
stress	Geraniol 1 vol%	-0.3
pH	Growth at pH7 and (C) D-Glucose	-0.3
nitrogen source	no extra (N); with MOPS	-0.3
stress	1-Pentanol 0.3 vol%	-0.3
stress	R2A with Fusaric 240 ug/mL	-0.3
nitrogen source	nitrogen source nitrite 1mM	-0.3
phage	PUT8 MOI 0.1	+0.3
nitrogen source	nitrate (N)	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.3
temperature shift	Temperature shift 10_to_25; with MOPS	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.3
phage	PUT8 MOI 10	+0.3
nitrogen source	D-2-Aminobutyric (N)	+0.4
phage	P. putida Sci small MOI 0.1	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
phage	PUT8 MOI 10	+0.5
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