Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4316
pH	Growth at pH7 and (C) Trisodium citrate	-1.9
phage	P. putida Sci Big MOI 0.1	-1.5
nitrogen source	2,6-diaminopimelic (N)	-1.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
pH	Growth at pH8 and (C) D-Glucose	-0.9
nitrogen source	D-2-Aminobutyric (N)	-0.9
temperature shift	Temperature shift 30_to_25	-0.8
pH	Growth at pH6 and (C) Trisodium citrate	-0.8
carbon source	2-Methylbutanoic (C)	-0.8
carbon source	Trisodium citrate 10 mM (C)	-0.8
nitrogen source	no extra (N); with MOPS	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
carbon source	Lauric (C)	-0.7
no stress control	Growth with no stress	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
temperature shift	Temperature shift 30_to_10	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.7
carbon source	D-Glucose (C); with MOPS	-0.7
stress	2-Ethylhexanol 0.4 vol%	-0.7
temperature	Growth at 30C	-0.6
nitrogen source	Urea (N); with MOPS	-0.6
microaerobic m9	microaerobic M9	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.7
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.7
phage	P. putida South MOI 10	+0.7
nitrogen source	2,6-diaminopimelic (N)	+1.3
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