Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4306
phage	P. putida Sci small MOI 0.1	-1.4
nitrogen source	Propandiamine (N)	-1.0
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-0.9
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.8
carbon source	Myristic (C)	-0.7
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6
no stress control	Growth with no stress	-0.6
nitrogen source	Urea (N)	-0.6
nitrogen source	Propandiamine (N)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
carbon source	butyrate (C)	-0.5
pH	pH 5	+0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.5
pH	pH 6	+0.6
phage	P. putida PUT10 MOI 0.1	+0.6
microaerobic m9	microaerobic M9	+0.6
nitrogen source	Urea (N); with MOPS	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.6
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.6
phage	P. putida PUT10 MOI 10	+0.6
phage	P. putida South MOI 0.1	+0.6
pH	pH 8	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
pH	Growth at pH7 and (C) Trisodium citrate	+0.6
phage	P. put South MOI 1	+0.6
carbon source	Crotonic (C)	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.7
phage	P. putida South MOI 1	+0.7
phage	P. put PUT 10 MOI 1	+0.8
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