Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4301
phage	P. putida Missley MOI 0.1	-2.6
carbon source	ferulate (C); with MOPS	-2.2
temperature	Growth at 34C	-1.6
temperature shift	Temperature shift 30_to_25; with MOPS	-1.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.2
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-1.1
pH	Growth at pH6 and (C) D-Glucose	-1.0
carbon source	D-Glucose (C); with MOPS	-1.0
temperature	Growth at 25C; with MOPS	-1.0
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-1.0
carbon source	Crotonic (C)	-1.0
carbon source	1,3-Butandiol (C)	-0.9
phage	P. putida South MOI 1	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.8
carbon source	Valeric (C)	-0.8
pH	Growth at pH9 and (C) Trisodium citrate	-0.8
carbon source	3-methyl-1-butanol (C)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.8
nitrogen source	nitrite (N)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.8
nitrogen source	nitrogen source nitrate 20mM	+0.8
stress	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL	+0.9
nitrogen source	no extra (N); with MOPS	+0.9
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
carbon source	L-Leucine (C)	+0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.0
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