Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4279
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.4
nitrogen source	nitrogen source nitrite 0.5mM	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
carbon source	D-Glucose (C)	-0.4
carbon source	ferulate (C); with MOPS	-0.3
nitrogen source	Ammonium chloride (N)	-0.3
nitrogen source	nitrate (N)	-0.3
carbon source	Delta-Nonalactone (C)	-0.3
stress	R2A with Fusaric 240 ug/mL	-0.3
nitrogen source	Urea (N)	-0.3
pH	Growth at pH8 and (C) D-Glucose	-0.3
pH	Growth at pH9 and (C) D-Glucose	-0.3
carbon source	acetate (C)	-0.3
temperature shift	Temperature shift 30_to_25; with MOPS	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.3
carbon source	Decanoic (C)	-0.3
no stress control	Growth with no stress	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	-0.3
nitrogen source	Adenine (N)	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3
nitrogen source	Adenine (N)	-0.3
carbon source	Acetate Carbon Source (5mM)	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
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