Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4267
nitrogen source NAG (N); with MOPS -1.6
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3
pH pH 5 -1.3
carbon source ferulate (C); with MOPS -1.2
carbon source Crotonic (C) -1.2
carbon source 3-methyl-1-butanol (C) -1.1
stress Growth with Chloride 200 mM; with MOPS -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0
stress Growth with Chloride 200 mM -1.0
carbon source 3-methyl-1-butanol (C) -1.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0
carbon source ferulate (C); with MOPS -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9
temperature Growth at 25C; with MOPS -0.9
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.9
nitrogen source L-Cysteine (N) -0.9
pH Growth at pH9 and (C) Trisodium citrate -0.8
carbon source D-Glucose (C); with MOPS -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.7
carbon source 5-Hydroxydodecanoate (C) -0.7
carbon source L-Alanine (C) -0.7
carbon source D-Glucose (C) -0.7
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7
carbon source 2,3-Butanediol (C) -0.7
carbon source Lignin Monomers (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0
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PP_4267