Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_4264
phage PUT 8 MOI 1 -4.6
phage PUT8 MOI 10 -2.5
phage PUT8 MOI 0.1 -2.5
stress R2A with Fusaric 480 ug/mL -2.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.1
stress R2A with Fusaric 480 ug/mL -2.1
phage PUT8 MOI 0.1 -2.0
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.0
stress R2A with Fusaric 480 ug/mL -2.0
stress R2A with Fusaric 480 ug/mL -2.0
phage P. put PUT 10 MOI 0.1 -1.8
stress R2A with Fusaric 480 ug/mL -1.7
stress R2A with Fusaric 480 ug/mL -1.7
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3
phage PUT8 MOI 10 -1.3
pH LB 0.1x with 55.5 mM D-Glucose; pH 4.6 -1.3
stress 3-methyl-3-butenol (pure) 0.25 vol% -1.2
stress Geraniol 1 vol% -1.2
phage P. put PUT 10 MOI 10 -1.2
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.2
phage P. putida South MOI 0.1 -1.2
pH Growth at pH6 and (C) Trisodium citrate -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1
phage P. putida PUT10 MOI 0.1 -1.1
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +1.1
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.2
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PP_4264