Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4256
nitrogen source no extra (N); with MOPS -1.3
phage P. putida Sci small MOI 0.1 -1.1
carbon source 3-Hydroxydecanoic (C) -1.0
nitrogen source NAG (N); with MOPS -0.9
micoeukaryotes C.elegans, mixed culture-1 -0.9
carbon source 5-Hydroxydodecanoate (C) -0.9
carbon source Delta-Undecalactone (C) -0.9
carbon source L-Lysine 10 mM (C) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8
carbon source 1,4-Butanediol (C) -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8
carbon source Delta-Dodecalactone (C) -0.7
carbon source DL-3-Hydroxybutyric (C) -0.7
carbon source 3-Hydroxydecanoic (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
carbon source L-Alanine (C) -0.7
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.7
stress Growth with Chloride 500 mM -0.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7
nitrogen source no extra (N); with MOPS +0.6
nitrogen source Ammonium chloride (N) +0.7
stress Growth with Chloride 200 mM +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7
temperature Growth at 25C +0.7
nitrogen source Urea (N); with MOPS +0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1
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PP_4256