Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4235
nitrogen source	2,6-diaminopimelic (N)	-1.0
pH	Growth at pH7 and (C) D-Glucose	-0.8
stress	3-methyl-3-butenol (pure) 0.25 vol%	-0.7
nitrogen source	Propandiamine (N)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.7
stress	3-methyl-1-butanol 0.4 vol%	-0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
temperature shift	Temperature shift 30_to_34; with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
carbon source	Valerolactone (C)	-0.6
stress	R2A with Fusaric 240 ug/mL	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
nitrogen source	Propandiamine (N)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
carbon source	D-Glucuronic gamma lactone (C)	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
carbon source	D-Glucaric (C)	-0.5
stress	Isobutyl alcohol 0.6 vol%	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.5
stress	Butanol 0.6 vol%	-0.5
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.5
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.4
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.7
		remove PP_4235