Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_4231
carbon source Vanillin (C) -2.5
carbon source Vanillin (C) -2.5
carbon source Vanillin (C) -1.9
carbon source Vanillin (C) -1.8
carbon source 1,5-Pentanediol (C) -1.0
nitrogen source nitrogen source nitrite 1mM -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9
nitrogen source Nicotinic Acid (N) -0.8
carbon source 1,5-Pentanediol (C) -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8
carbon source Valerolactone (C) -0.8
nitrogen source Nicotinic Acid (N) -0.8
carbon source Valeric (C) -0.7
phage P. putida Sci Big MOI 0.1 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7
temperature shift Temperature shift 10_to_30; with MOPS -0.7
stress Growth with Chloride 500 mM; with MOPS -0.6
carbon source acetate (C) -0.6
nitrogen source Urea (N) -0.6
carbon source 1,4-Butanediol (C) -0.6
reactor_pregrowth Adaptation in M9 media timecourse 4; day 3 -0.6
carbon source ferulate (C); with MOPS +0.6
carbon source carbon source 4-vinylphenol 0.01 mM +0.7
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.7
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7
pH pH 5 +0.8
pH pH 4 +0.9
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
nitrogen source D-2-Aminobutyric (N) +1.0
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PP_4231