Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_4230
phage P. putida Sci small MOI 0.1 -1.2
pH Growth at pH6 and (C) D-Glucose -0.9
carbon source butyrate (C) -0.8
carbon source Valerolactone (C) -0.8
phage P. putida Sci Big MOI 0.1 -0.7
pH Growth at pH8 and (C) Trisodium citrate -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6
nitrogen source 2,6-diaminopimelic (N) -0.6
nitrogen source D-2-Aminobutyric (N) -0.6
carbon source 2,3-Butanediol (C) -0.5
phage P. putida PUT10 MOI 1 -0.5
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.5
phage P. put South MOI 10 -0.5
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5
pH Growth at pH9 and (C) D-Glucose +0.5
nitrogen source Ammonium chloride and TNT (N) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
nitrogen source Ammonium chloride and TNT (N) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
stress R2A with Fusaric 240 ug/mL +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.6
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.6
stress Growth with Chloride 500 mM +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.0
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PP_4230