Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4177
nitrogen source	Urea (N)	-0.6
carbon source	D-Glucose (C)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-0.5
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.5
pH	Growth at pH7 and (C) Trisodium citrate	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.5
phage	PUT8 MOI 0.1	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4
nitrogen source	D-2-Aminobutyric (N)	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4
carbon source	Protocatechuic Acid (C)	-0.4
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
temperature shift	Temperature shift 30_to_25	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
pH	Valerolactone (C) pH 6.5	+0.4
pH	pH 6	+0.4
temperature shift	Temperature shift 30_to_21; with MOPS	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.5
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.5
stress	Growth with Chloride 200 mM; with MOPS	+0.5
pH	Growth at pH8 and (C) D-Glucose	+0.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
phage	PUT 8 MOI 1	+0.6
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