Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4167
phage	P. putida Sci small MOI 0.1	-1.2
nitrogen source	2,6-diaminopimelic (N)	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.9
phage	P. putida Missley MOI 0.1	-0.8
carbon source	D-Lysine 10 mM (C)	-0.7
stress	Growth with Chloride 500 mM	-0.7
carbon source	3-methyl-2-oxopentanoic (C)	-0.7
stress	Growth with Chloride 500 mM; with MOPS	-0.6
pH	pH 9	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
phage moi 100	Time6-phageFRS	-0.5
carbon source	1,3-Hexanediol (C)	-0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.5
stress	R2A with Fusaric 120 ug/mL	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	+0.4
pH	Growth at pH9 and (C) Trisodium citrate	+0.4
carbon source	Octanoic (C)	+0.4
temperature shift	Temperature shift 30_to_21; with MOPS	+0.5
nitrogen source	nitrogen source nitrite 0.5mM	+0.6
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.6
carbon source	4-Methyl-2-oxopentanoic (C)	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
phage	PUT 8 MOI 1	+0.7
pH	Valerolactone (C) pH 6.5	+0.7
pH	Growth at pH7 and (C) Trisodium citrate	+0.7
		remove PP_4167