Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4159
phage	P. putida Missley MOI 0.1	-2.9
nitrogen source	NAG (N); with MOPS	-2.7
phage	P. putida Sci small MOI 0.1	-1.7
carbon source	Lignin Monomers (C)	-1.6
phage	P. put PUT 10 MOI 10	-1.6
carbon source	ferulate (C); with MOPS	-1.5
pH	Growth at pH9 and (C) Trisodium citrate	-1.5
temperature	Growth at 25C	-1.4
phage	P. put PUT 10 MOI 0.1	-1.4
pH	Growth at pH7 and (C) D-Glucose	-1.4
carbon source	ferulate (C); with MOPS	-1.3
pH	pH 9	-1.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
pH	Growth at pH7 and (C) Trisodium citrate	-1.2
phage	P. put South MOI 10	-1.2
carbon source	DL-3-Hydroxyisobutyric (C)	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.2
phage	P. put PUT 10 MOI 10	-1.1
temperature shift	Temperature shift 30_to_25	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.1
micoeukaryotes	C.elegans, mixed culture-2	-1.1
pH	pH 8	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-1.1
temperature shift	Temperature shift 30_to_34; with MOPS	-1.1
carbon source	Vanillin (C)	+1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+1.3
pH	Valerolactone (C) pH 6.5	+1.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.6
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