Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4131
carbon source	Delta-Undecalactone (C)	-4.2
carbon source	Levulinic Acid (C)	-3.9
carbon source	Delta-Undecalactone (C)	-3.8
carbon source	Delta-Decalactone (C)	-3.8
carbon source	Levulinic Acid (C)	-3.8
carbon source	3-methyl-1-butanol (C)	-3.8
carbon source	3-methyl-1-butanol (C)	-3.5
pH	Growth at pH7 and (C) D-Glucose	-3.5
carbon source	Delta-Dodecalactone (C)	-3.4
carbon source	Vanillin (C)	-3.4
carbon source	1,4-Butanediol (C)	-3.4
carbon source	4-Methyl-2-oxopentanoic (C)	-3.2
carbon source	Vanillin (C)	-3.2
carbon source	Delta-Decalactone (C)	-3.2
carbon source	2-methyl-1-butanol (C)	-3.1
carbon source	4-Methyl-2-oxopentanoic (C)	-3.0
carbon source	Delta-Dodecalactone (C)	-2.9
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-2.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-2.8
carbon source	Ferulic Acid (C)	-2.7
carbon source	M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB	-2.7
carbon source	3-Hydroxypropionate (C)	-2.7
carbon source	1,4-Butanediol (C)	-2.7
carbon source	3-Hydroxypropionate (C)	-2.7
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+2.7
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+2.7
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+3.0
micoeukaryotes	C.elegans, mixed culture-2	+3.4
nitrogen source	DL-2-Aminobutyric (N)	+3.9
nitrogen source	DL-2-Aminobutyric (N)	+4.0
		remove PP_4131