Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4130
carbon source	Levulinic Acid (C)	-3.2
carbon source	Delta-Undecalactone (C)	-3.1
carbon source	3-Hydroxypropionate (C)	-3.0
carbon source	Delta-Undecalactone (C)	-3.0
carbon source	Decanoic (C)	-2.9
carbon source	Levulinic Acid (C)	-2.9
carbon source	2-methyl-1-butanol (C)	-2.9
carbon source	Vanillin (C)	-2.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-2.7
carbon source	3-methyl-1-butanol (C)	-2.7
pH	Growth at pH9 and (C) Trisodium citrate	-2.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-2.6
carbon source	L-Lysine (C)	-2.6
carbon source	1,3-Butandiol (C)	-2.6
carbon source	3-methyl-1-butanol (C)	-2.5
carbon source	Delta-Dodecalactone (C)	-2.5
nitrogen source	nitrogen source Ammonium chloride 20mM	-2.4
r2a control	R2A control	-2.4
carbon source	1,3-Butandiol (C)	-2.4
carbon source	Vanillin (C)	-2.4
carbon source	Acetate Carbon Source (20mM)	-2.3
carbon source	4-Methyl-2-oxopentanoic (C)	-2.3
carbon source	L-Lysine (C)	-2.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-2.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.2
carbon source	Oleic (C)	-2.2
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+2.5
micoeukaryotes	C.elegans, mixed culture-2	+3.3
nitrogen source	DL-2-Aminobutyric (N)	+3.8
nitrogen source	DL-2-Aminobutyric (N)	+3.8
		remove PP_4130