Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4122
carbon source	Levulinic Acid (C)	-5.4
carbon source	4-Methyl-2-oxopentanoic (C)	-4.8
carbon source	Vanillin (C)	-4.8
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-4.8
carbon source	Delta-Undecalactone (C)	-4.8
carbon source	Delta-Undecalactone (C)	-4.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-4.6
carbon source	Delta-Decalactone (C)	-4.4
carbon source	3-methyl-1-butanol (C)	-4.3
carbon source	Delta-Decalactone (C)	-4.3
carbon source	Delta-Dodecalactone (C)	-4.2
carbon source	Delta-Dodecalactone (C)	-4.2
temperature	Growth at 25C	-4.2
stress	R2A with Fusaric 480 ug/mL	-4.0
stress	Growth with Chloride 500 mM; with MOPS	-4.0
pH	Growth at pH9 and (C) Trisodium citrate	-4.0
pH	Growth at pH6 and (C) D-Glucose	-4.0
no stress control	Growth with no stress	-4.0
temperature	Growth at 30C; with MOPS	-3.9
nitrogen source	nitrate (N)	-3.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-3.9
nitrogen source	Ammonium chloride (N); with MOPS	-3.9
pH	Growth at pH6 and (C) Trisodium citrate	-3.9
nitrogen source	Urea (N)	-3.8
pH	Growth at pH6 and (C) Trisodium citrate	-3.8
pH	Growth at pH9 and (C) Trisodium citrate	-3.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-3.8
nitrogen source	DL-2-Aminobutyric (N)	+3.9
nitrogen source	DL-2-Aminobutyric (N)	+4.1
micoeukaryotes	C.elegans, mixed culture-2	+4.2
		remove PP_4122