Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_4120
carbon source	Levulinic Acid (C)	-4.1
carbon source	Levulinic Acid (C)	-4.0
carbon source	Delta-Undecalactone (C)	-3.9
carbon source	3-methyl-1-butanol (C)	-3.9
carbon source	Delta-Decalactone (C)	-3.8
carbon source	Beta-alanine (C)	-3.7
carbon source	4-Methyl-2-oxopentanoic (C)	-3.7
carbon source	1,4-Butanediol (C)	-3.6
carbon source	Delta-Dodecalactone (C)	-3.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-3.6
carbon source	1,4-Butanediol (C)	-3.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-3.4
carbon source	Delta-Undecalactone (C)	-3.3
carbon source	Delta-Dodecalactone (C)	-3.3
carbon source	Delta-Decalactone (C)	-3.2
carbon source	3-Hydroxypropionate (C)	-3.2
carbon source	2-methyl-1-butanol (C)	-3.1
carbon source	L-Glutamic (C)	-3.1
carbon source	L-Lysine (C)	-3.1
carbon source	Vanillin (C)	-3.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-3.0
carbon source	3-methyl-1-butanol (C)	-3.0
carbon source	1,3-Butandiol (C)	-2.9
carbon source	Trisodium citrate (C)	-2.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-2.8
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+3.0
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+3.3
nitrogen source	DL-2-Aminobutyric (N)	+3.7
nitrogen source	DL-2-Aminobutyric (N)	+3.9
micoeukaryotes	C.elegans, mixed culture-2	+4.0
		remove PP_4120