Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4104
phage	PUT8 MOI 0.1	-1.1
nitrogen source	NAG (N); with MOPS	-1.0
pH	pH 9	-0.9
pH	Growth at pH7 and (C) Trisodium citrate	-0.7
nitrogen source	Urea (N)	-0.7
carbon source	Valerolactone (C)	-0.7
carbon source	D-Glucaric (C)	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.7
carbon source	D-Glucose (C)	-0.7
pH	pH 7	-0.6
nitrogen source	2,6-diaminopimelic (N)	-0.6
phage	PUT 8 MOI 1	-0.6
nitrogen source	Propiolactam (N)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
carbon source	acetate (C)	-0.6
dilutelb	LB 0.1x with 55.5 mM D-Glucose	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
phage	P. putida Sci Big MOI 0.1	-0.6
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5
temperature	Growth at 30C; with MOPS	-0.5
phage	P. put South MOI 10	-0.5
nitrogen source	Putrescine (N)	-0.5
nitrogen source	L-Pipecolic Acid (N)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
stress	Growth with Chloride 500 mM; with MOPS	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
pH	Growth at pH6 and (C) Trisodium citrate	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.9
		remove PP_4104