Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_4102
pH	Valerolactone (C) pH 6.5	-1.7
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-1.5
nitrogen source	D-2-Aminobutyric (N)	-1.5
temperature shift	Temperature shift 30_to_21; with MOPS	-1.4
nitrogen source	NAG (N); with MOPS	-1.2
carbon source	D-Glucose (C)	-1.2
nitrogen source	Propiolactam (N)	-1.1
carbon source	acetate (C)	-1.1
carbon source	L-Leucine (C)	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
no stress control	Growth with no stress	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.0
temperature	Growth at 30C	-0.9
carbon source	Valerolactone (C)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
nitrogen source	NAG (N)	-0.9
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.9
stress	3-methyl-3-butenol (pure) 0.25 vol%	-0.9
carbon source	carbon source Bisabolene 48.9 mM	+0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.9
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.9
carbon source	4-Methyl-2-oxopentanoic (C)	+1.0
pH	pH 6	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.1
carbon source	carbon source D-Glucose 55.5 mM	+1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4
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