Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4074
carbon source	ferulate (C); with MOPS	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3
carbon source	Nonanoic (C)	-1.1
carbon source	D-Glucose (C)	-1.0
nitrogen source	Ammonium chloride (N); with MOPS	-1.0
phage	P. putida Sci small MOI 0.1	-1.0
no stress control	Growth with no stress	-1.0
temperature shift	Temperature shift 10_to_25; with MOPS	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.0
pH	Growth at pH6 and (C) Trisodium citrate	-1.0
pH	Growth at pH9 and (C) Trisodium citrate	-1.0
pH	Valerolactone (C) pH 6.5	-1.0
pH	Growth at pH6 and (C) D-Glucose	-1.0
phage	P. putida PUT 7 MOI 1	-0.9
temperature	Growth at 10C; with MOPS	-0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.9
temperature	Growth at 10C; with MOPS	-0.9
stress	R2A with Fusaric 240 ug/mL	-0.9
nitrogen source	nitrogen source nitrite 0.5mM	-0.8
stress	Growth with Chloride 200 mM; with MOPS	-0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-0.8
pH	Growth at pH6 and (C) Trisodium citrate	-0.8
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-0.8
nitrogen source	Propandiamine (N)	-0.7
carbon source	ferulate (C); with MOPS	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+1.0
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