Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4071
pH	Growth at pH6 and (C) D-Glucose	-0.5
pH	Growth at pH7 and (C) D-Glucose	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
no stress control	Growth with no stress	-0.3
nitrogen source	Ammonium chloride (N)	-0.2
nitrogen source	nitrogen source Ammonium chloride 20mM	-0.2
temperature shift	Temperature shift 10_to_30; with MOPS	-0.2
carbon source	Delta-Dodecalactone (C)	-0.2
phage	P. putida South MOI 10	-0.2
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.2
microaerobic m9	microaerobic M9	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.2
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.2
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2
dilutelb	LB 0.1x with 55.5 mM D-Glucose	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.2
pH	Growth at pH6 and (C) D-Glucose	+0.2
pH	Growth at pH7 and (C) D-Glucose	+0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2
stress	3-methyl-1-butanol 0.4 vol%	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.2
carbon source	DL-3-Hydroxybutyric (C)	+0.2
no phage control	Time6-nophage	+0.2
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.2
pH	Growth at pH6 and (C) D-Glucose	+0.2
carbon source	1,3-Hexanediol (C)	+0.2
carbon source	DL-3-Hydroxyisobutyric (C)	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
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