Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4021
pH	Growth at pH6 and (C) D-Glucose	-0.9
carbon source	4-Methyl-2-oxopentanoic (C)	-0.5
pH	Valerolactone (C) pH 6.5	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
pH	D-Glucose (C) pH 6	-0.4
carbon source	ferulate (C); with MOPS	-0.4
temperature shift	Temperature shift 10_to_21	-0.4
nitrogen source	NAG (N); with MOPS	-0.4
temperature shift	Temperature shift 10_to_21; with MOPS	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
stress	R2A with Fusaric 240 ug/mL	-0.3
carbon source	D-Glucose (C) 5 mM	-0.3
phage	P. put PUT 10 MOI 0.1	-0.3
pH	Growth at pH6 and (C) Trisodium citrate	-0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.3
carbon source	L-Phenylalanine 5 mM (C)	+0.3
nitrogen source	NAG (N); with MOPS	+0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.4
carbon source	carbon source Bisabolol 45 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.4
carbon source	L-Leucine (C)	+0.4
nitrogen source	2,6-diaminopimelic (N)	+0.4
pH	pH 7	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
carbon source	Delta-Dodecalactone (C)	+0.6
carbon source	Delta-Dodecalactone (C)	+0.6
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