Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4019
phage	P. putida Missley MOI 0.1	-0.7
phage	P. put South MOI 10	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.6
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
temperature shift	Temperature shift 10_to_25; with MOPS	-0.5
carbon source	ferulate (C); with MOPS	-0.5
stress	R2A with Fusaric 240 ug/mL	-0.5
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.4
pH	Growth at pH7 and (C) D-Glucose	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
carbon source	D-Glucose (C); with MOPS	-0.4
temperature	Growth at 30C; with MOPS	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
nitrogen source	Ammonium chloride (N); with MOPS	-0.3
pH	Growth at pH6 and (C) Trisodium citrate	-0.3
pH	Growth at pH6 and (C) D-Glucose	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3
phage	P. putida Sci small MOI 0.1	+0.3
stress	Butanol 0.6 vol%	+0.3
nitrogen source	nitrogen source nitrate 20mM	+0.4
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	+0.4
carbon source	acetate (C)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
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