Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_3998
phage P. putida PUT 7 MOI 1 -0.6
phage P. putida Sci Big MOI 0.1 -0.5
phage P. putida Missley MOI 0.1 -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.4
phage P. putida Sci small MOI 0.1 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM -0.3
pH Growth at pH6 and (C) D-Glucose -0.3
nitrogen source NAG (N); with MOPS -0.3
phage P. put PUT 10 MOI 10 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.2
pH Valerolactone (C) pH 6.5 -0.2
pH pH 9 -0.2
temperature shift Temperature shift 10_to_30 -0.2
carbon source D-Glucose (C); with MOPS -0.2
phage P. put PUT 10 MOI 0.1 -0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2
pH Growth at pH6 and (C) Trisodium citrate -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2
nitrogen source nitrate (N) +0.2
micoeukaryotes C.elegans, mixed culture-2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
no phage control Time6-nophage +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.3
temperature Growth at 25C +0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.3
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PP_3998