Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3989
phage PUT 8 MOI 1 -2.5
carbon source Valeric (C) -2.1
pH Growth at pH6 and (C) D-Glucose -2.0
carbon source 1,3-Butandiol (C) -1.6
pH Growth at pH7 and (C) D-Glucose -1.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3
nitrogen source NAG (N); with MOPS -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3
carbon source pyruvate (C) -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1
phage P. put South MOI 0.1 -1.1
pH Growth at pH7 and (C) D-Glucose -1.1
pH Growth at pH6 and (C) Trisodium citrate -1.0
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.0
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0
stress R2A with Fusaric 120 ug/mL -0.9
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9
carbon source ferulate (C); with MOPS +0.9
nitrogen source nitrite (N) +1.0
temperature shift Temperature shift 10_to_25; with MOPS +1.0
temperature Growth at 30C; with MOPS +1.0
nitrogen source no extra (N); with MOPS +1.0
temperature shift Temperature shift 10_to_30 +1.1
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.1
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1
carbon source D-Glucose (C) +1.1
temperature Growth at 30C; with MOPS +1.1
no stress control Growth with no stress +1.2
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PP_3989