Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_3962
pH Growth at pH6 and (C) Trisodium citrate -0.5
nitrogen source Ammonium chloride (N) -0.5
carbon source carbon source 4-vinylphenol 0.1 mM -0.4
pH pH 5 -0.4
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4
carbon source carbon source Bisabolol 45 mM -0.4
nitrogen source 2,6-diaminopimelic (N) -0.4
stress R2A with Fusaric 240 ug/mL -0.4
pH pH 8 -0.4
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
temperature shift Temperature shift 10_to_34; with MOPS -0.4
carbon source D-Glucose (C) -0.4
carbon source butyrate (C) -0.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter +0.3
no stress control Growth with no stress +0.4
carbon source 4-Methyl-2-oxopentanoic (C) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
carbon source D-Glucose (C); with MOPS +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
temperature shift Temperature shift 30_to_34; with MOPS +0.5
nitrogen source nitrogen source nitrite 1mM +0.5
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5
nitrogen source NAG (N); with MOPS +0.7
remove
PP_3962