Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_3948
nitrogen source	Nicotinic Acid (N)	-1.4
nitrogen source	Nicotinic Acid (N)	-1.3
phage	P. putida Sci small MOI 0.1	-0.8
pH	Growth at pH6 and (C) D-Glucose	-0.5
phage	P. putida Sci Big MOI 0.1	-0.5
carbon source	ferulate (C); with MOPS	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.3
nitrogen source	NAG (N); with MOPS	-0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3
r2a control	R2A control	-0.2
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM	-0.2
nitrogen source	Urea (N)	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
pH	Growth at pH6 and (C) D-Glucose	-0.2
nitrogen source	spermidine (N)	-0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2
pH	Growth at pH7 and (C) Trisodium citrate	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2
carbon source	Butanol (C)	+0.2
carbon source	4-Methyl-2-oxopentanoic (C)	+0.2
pH	Growth at pH8 and (C) D-Glucose	+0.3
carbon source	1,3-Butandiol (C)	+0.3
nitrogen source	nitrogen source nitrite 1mM	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
pH	Growth at pH7 and (C) D-Glucose	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
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